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Comparison of a 3-Set Genotyping System with Multilocus Sequence Typing for Streptococcus agalactiae (Group B Streptococcus)

机译:无乳链球菌(B组链球菌)的3位基因分型系统与多基因座序列分型的比较

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摘要

Group B streptococcus (GBS; Streptococcus agalactiae) is the most common cause of neonatal and obstetric sepsis and is an increasingly important cause of septicemia in elderly individuals and immunocompromised patients. Epidemiological studies of GBS infections require comprehensive typing systems that provide information about variable characteristics, such as antigenic type, virulence, or antibiotic resistance, as well as the “backbone” structure or the genetic lineage of isolates. We have previously described a 3-set genotyping system that identifies the molecular serotype (MS) or molecular serosubtype (msst), the protein gene profile, and the presence of several mobile genetic elements (F. Kong, D. Martin, G. James, and G. L. Gilbert, J. Med. Microbiol. 52:337-344, 2003). In this study, 83 clinical GBS isolates which had been previously studied by multilocus sequence typing (MLST) (N. Jones, J. F. Bohnsack, S. Takahashi, K. A. Oliver, M. S. Chan, F. Kunst, P. Glaser, C. Rusniok, D. W. Crook, R. M. Harding, N. Bisharat, and B. G. Spratt, J. Clin. Microbiol. 41:2530-2536, 2003) were examined by using the 3-set genotyping system. Genotypes were assigned to five isolates that were nontypeable by conventional serotyping. There were 27 “3-set” genotypes, 24 multilocus sequence types (STs), and 35 unique combinations (or strains), of which the 4 most common, msst III-2 (ST-17), msst III-1 (ST-19), Ia-1 (ST-23), and V-1 (ST-1), accounted for more than 60% of isolates. The 83 isolates were grouped into seven clusters, with a good correlation between the multilocus STs and the genotypes. The combination of 3-set genotyping and MLST adds discriminatory power to strain typing of GBS, which will be useful for future studies of the epidemiology and pathogenesis of GBS disease.
机译:B组链球菌(GBS;无乳链球菌)是新生儿和产科败血症的最常见原因,也是老年人和免疫功能低下患者败血病的越来越重要的原因。 GBS感染的流行病学研究要求使用全面的分型系统,以提供有关可变特征(例如抗原类型,毒力或抗生素抗性)以及“骨干”结构或分离株的遗传谱系的信息。先前我们已经描述了一套3套基因分型系统,可识别分子血清型(MS)或分子血清亚型(msst),蛋白质基因图谱以及几种可移动的遗传元件的存在(F. Kong,D. Martin,G. James ,和GL Gilbert,J。Med。Microbiol。52:337-344,2003)。在这项研究中,先前已通过多基因座序列分型(MLST)研究了83种临床GBS分离株(N. Jones,JF Bohnsack,S。Takahashi,KA Oliver,MS Chan,F。Kunst,P。Glaser,C。Rusniok, DW Crook,RM Harding,N.Bisharat和BG Spratt,J.Clin.Microbiol.41:2530-2536,2003)通过使用三组基因分型系统进行了检查。基因型被分配给五个无法通过常规血清分型分型的菌株。有27种“三集”基因型,24种多基因座序列类型(ST)和35种独特的组合(或品系),其中4种最常见的分别是msst III-2(ST-17),msst III-1(ST -19),Ia-1(ST-23)和V-1(ST-1)占分离株的60%以上。 83个分离株被分为七个簇,在多位点ST和基因型之间具有良好的相关性。 3组基因分型和MLST的结合为GBS菌株的分型增加了鉴别力,这将有助于GBS疾病的流行病学和发病机理的进一步研究。

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